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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. PAX9, paired box 9
Sequence ID:NM_006194
RefSeqGene ID:NG_013357
Entrez Gene ID:5083
Ensembl ID:ENSG00000198807

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDSNPSNP: GeneViewSNP: VarViewAssembliesCancer Aberrations

Gene Expression Data


Associated Diseases (from OMIM)

DiseaseOther Genes
TOOTH AGENESIS, SELECTIVE, 1, WITH OR WITHOUT OROFACIAL CLEFTMSX1

Cytogenetic Location (from UniGene)

Cytogenetic Location:14q13.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:Unknown

NM_006194 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
13333712677237127104
3347303713090137131297
73113573713210137132727
135814973713566637135805
149831043714540237147008

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3534582Full LengthBC001159paired box 9

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_006194 NP_006185 P55771 PAX

Related Sequences

 
mRNAGenPeptSwissProt
U59628 AAD09487 O95616
BC001159 AAH01159 P55771
EU176711 ABW03512  
EU176374 ABW03825  
AB248958 BAE79273 Q2L4T1
AK313627 BAG36387 B2R940
X92850 CAA63436 P55771

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens PAX9 NP_006185 M.musculus Pax9 18511 Gene Info NP_035171 99
R.norvegicus Pax9 362741   NP_001034628 98

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)