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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. SYN3, synapsin III
Sequence ID:NM_001135774
NM_003490
NM_133633
NM_133632
RefSeqGene ID:NG_029545
Entrez Gene ID:8224
Ensembl ID:ENSG00000185666

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:22q12.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:22: 32909399 - 33454329

 Exon Info From UCSC:
NM_001135774
NM_003490
NM_133633

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
9052390Full LengthBC143874synapsin III
30915375Full LengthBC075066synapsin III
30915588Full LengthBC075065synapsin III
40126011Full LengthBC117460synapsin III

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_598344  NP_003481  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001135774 NP_001129246    
NM_003490 NP_003481 O14994 Synapsin_N
Synapsin_C
NM_133633 NP_598344   Synapsin_N
Synapsin_C

Related Sequences

 
mRNAGenPeptSwissProt
AF046873 AAC15101 O14994
BC075065 AAH75065 O14994
BC075066 AAH75066 O14994
BC117460 AAI17461 Q17R54
BC143874 AAI43875 O14994
HQ258468 ADR83222  
AB209684 BAD92921 Q59EX7
AK300171 BAG61952 B4DTE0
CR456589 CAG30475 O14994
CU013189 CAK54620  
CU013477 CAK54919  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens SYN3 NP_003481 R.norvegicus Syn3 29130   NP_058805 92
M.musculus Syn3 27204 Gene Info NP_038750 92

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)