Skip Navigation
NCI banner National Cancer Institute U.S. National Institutes of Health National Cancer Institute
Genes
  • Gene Tools
Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. CNOT6, CCR4-NOT transcription complex, subunit 6
Sequence ID:NM_015455
Entrez Gene ID:57472
Ensembl ID:ENSG00000113300

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer Aberrations

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:5q35.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:5: 179921432 - 180005349

 Exon Info From UCSC:
NM_015455

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
8862606Full LengthBC152469CCR4-NOT transcription complex, subunit 6
100064206Full LengthBC160174CCR4-NOT transcription complex, subunit 6
4414956IncompleteBC015331CCR4-NOT transcription complex, subunit 6

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_056270  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_015455 NP_056270 Q9ULM6 LRR_1
Exo_endo_phos

Related Sequences

 
mRNAGenPeptSwissProt
BC027476 AAH27476 Q8TAJ0
BC152469 AAI52470 Q9ULM6
BC160174 AAI60174  
AB033020 BAA86508 Q9ULM6
AK314752 BAG37291 Q8TAJ0

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens CNOT6 NP_056270 M.musculus Cnot6 104625 Gene Info NP_997649 96
R.norvegicus Cnot6 287249   NP_001013878 96
A.gambiae AgaP_AGAP004405 1274550   XP_313691 60
D.melanogaster twin 42880   NP_732964 59
C.elegans ccr-4 178184   NP_001023608 52

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)