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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. WHSC1L1, Wolf-Hirschhorn syndrome candidate 1-like 1
Sequence ID:NM_017778
NM_023034
RefSeqGene ID:NG_023292
Entrez Gene ID:54904
Ensembl ID:ENSG00000147548

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer Aberrations

Gene Expression Data


Associated Diseases (from OMIM)

DiseaseOther Genes
LEUKEMIA, ACUTE MYELOGENOUSARHGEF12
CBFB
CEBPA
CHIC2
ETV6
FLT3
GATA2
GMPS
JAK2
KIT
LPP
MLF1
MLLT10
NPM1
NSD1
NUP214
PICALM
RUNX1
RUNX1
SH3GL1
TERT

Cytogenetic Location (from UniGene)

Cytogenetic Location:8p11.2Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:8: 38174316 - 38239768

 Exon Info From UCSC:
NM_017778
NM_023034

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
7961962Full LengthBC115006Wolf-Hirschhorn syndrome candidate 1-like 1
8069223Full LengthBC101717Wolf-Hirschhorn syndrome candidate 1-like 1
8322521Full LengthBC113469Wolf-Hirschhorn syndrome candidate 1-like 1
9052018Full LengthBC143510Wolf-Hirschhorn syndrome candidate 1-like 1
3505788IncompleteBC000030Wolf-Hirschhorn syndrome candidate 1-like 1
3546345IncompleteBC007787Wolf-Hirschhorn syndrome candidate 1-like 1
4179405IncompleteBC073858Wolf-Hirschhorn syndrome candidate 1-like 1
4770567IncompleteBC107734Wolf-Hirschhorn syndrome candidate 1-like 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_075447  NP_060248  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_017778 NP_060248     PWWP
NM_023034 NP_075447 Q9BZ95 EC 2.1.1.43 PHD
PWWP
SET

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
AF255649 AAG44637 Q9BZ95 EC 2.1.1.43
BC012059 AAH12059 Q9BZ95 EC 2.1.1.43
BC062631 AAH62631 Q9BZ95 EC 2.1.1.43
BC101717 AAI01718 Q9BZ95 EC 2.1.1.43
BC107734 AAI07735 Q9BZ95 EC 2.1.1.43
BC113469 AAI13470 Q9BZ95 EC 2.1.1.43
BC115006 AAI15007 Q9BZ95 EC 2.1.1.43
BC143510 AAI43511 B7ZL11  
AF332468 AAK00354 Q9BZ95 EC 2.1.1.43
AF332469 AAK00355 Q9BZ95 EC 2.1.1.43
AF318339 AAL55846 Q8WYV9  
JF432144 ADZ15361    
AK000360 BAA91110 Q9BZ95 EC 2.1.1.43
AK022560 BAB14099 Q9BZ95 EC 2.1.1.43
AJ295990 CAC28350 Q9BZ95 EC 2.1.1.43
AJ295991 CAC28351 Q9BZ95 EC 2.1.1.43
AJ295992 CAC28352 Q9BZ95 EC 2.1.1.43

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens WHSC1L1 NP_075447 M.musculus Whsc1l1 234135 Gene Info NP_001074738 92
R.norvegicus Whsc1l1 290831   NP_001099560 91

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)