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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. COPS3, COP9 constitutive photomorphogenic homolog subunit 3 (Arabidopsis)
Sequence ID:NM_001199125
NM_003653
Entrez Gene ID:8533
Ensembl ID:ENSG00000141030

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, pituitary gland, placenta, pooled tissue, prostate, skin, spleen, stem cell, stomach, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:17p11.2Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:17: 17150149 - 17184508


Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3537198Full LengthBC001891COP9 constitutive photomorphogenic homolog subunit 3 (Arabidopsis)

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_003644  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001199125 NP_001186054    
NM_003653 NP_003644 Q9UNS2 PCI

Related Sequences

 
mRNAGenPeptSwissProt
AF031647 AAC14197 Q9UNS2
AF098109 AAD41247 Q9UNS2
BC001891 AAH01891 Q9UNS2
HQ447242 ADQ31729  
AK312476 BAG35380 Q9UNS2
AK297706 BAG60063 B4DN01
AK302304 BAG63643 Q9UNS2
AK316400 BAH14771 Q9UNS2

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens COPS3 NP_003644 M.musculus Cops3 26572 Gene Info NP_036121 100
R.norvegicus Cops3 287367   NP_001004200 100
A.gambiae AgaP_AGAP006445 1277056   XP_316484 56
D.melanogaster CSN3 40308   NP_524190 54
A.thaliana COP13 831275   NP_568296 39

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)