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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. GTF2H2, general transcription factor IIH, polypeptide 2, 44kDa
Sequence ID:NM_001515
Entrez Gene ID:2966
Ensembl ID:ENSG00000145736

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssemblies

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:5q13.2Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:5: 68856068 - 68888600

 Exon Info From UCSC:
NM_001515

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
100014640Full LengthBC141603general transcription factor IIH, polypeptide 2, 44kDa
100014364BC140303general transcription factor IIH, polypeptide 2, 44kDa

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_001506  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001515 NP_001506 Q13888 Ssl1
C1_4

Related Sequences

 
mRNAGenPeptSwissProt
U21911 AAA64502 Q13888
U21910 AAA64503 Q13888
AF078847 AAD44479 Q13888
BC005345 AAH05345 Q13888
Q86U80
BC140303 AAI40304  
BC141603 AAI41604  
BC171919 AAI71919 B7ZW82
BT006773 AAP35419 Q86U80
HQ448132 ADQ32613  
AK296578 BAG59198 B4DKI6
Z30094 CAA82910 Q13888

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens GTF2H2 NP_001506 M.musculus Gtf2h2 23894 Gene Info NP_071294 97
R.norvegicus Gtf2h2 294693   NP_001070896 97
A.gambiae AgaP_AGAP010559 1275295   XP_314533 53
D.melanogaster Ssl1 40509   NP_649427 53
A.thaliana GTF2H2 839332   NP_683275 46
C.elegans T16H12.4 176421   NP_499239 44
S.pombe ssl1 2539194   NP_587800 43
S.cerevisiae SSL1 850691   NP_013105 42
N.crassa NCU01831 3872762   XP_956615 42

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)