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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. STX7, syntaxin 7
Sequence ID:NM_003569
Entrez Gene ID:8417
Ensembl ID:ENSG00000079950

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer Aberrations

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:6q23.1Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:Unknown

NM_003569 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
13327132778662132781988
33283410132785131132785213
34113483132789541132789613
34843580132791089132791185
35813633132791712132791764
36343771132792601132792738
37723865132793420132793513
38663935132796731132796800
39364078132824584132824726
40794270132834145132834336

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3860059Full LengthBC011975syntaxin 7

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_003569 NP_003560 O15400  

Related Sequences

 
mRNAGenPeptSwissProt
U77942 AAC51851 O15400
BC011975 AAH11975 O15400
AK294911 BAG57998 B4DH37
AK301464 BAG62984 B4DWC2

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens STX7 NP_003560 M.musculus Stx7 53331 Gene Info NP_058077 95
R.norvegicus Stx7 60466   NP_068641 93
A.gambiae AgaP_AGAP005543 1276226   XP_315543 45
D.melanogaster Syx7 36173   NP_730632 44
A.thaliana SYP23 827494   NP_001078403 33
A.thaliana VAM3 834730   NP_568671 32
N.crassa NCU06777 3879828   XP_963618 30
S.pombe pep12 2540289   NP_595100 29
S.cerevisiae PEP12 854201   NP_014679 27

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)