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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. TLR5, toll-like receptor 5
Sequence ID:NM_003268
RefSeqGene ID:NG_016244
Entrez Gene ID:7100
Ensembl ID:ENSG00000187554

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Associated Diseases (from OMIM)

DiseaseOther Genes
LEGIONAIRE DISEASE 
SYSTEMIC LUPUS ERYTHEMATOSUS 

Cytogenetic Location (from UniGene)

Cytogenetic Location:1q41-q42Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:1: 223283646 - 223316624

NM_003268 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
113640223282747223286376
36413805223305816223305980
38063988223308023223308205
39894074223310519223310604
40754190223314989223315104
41914277223316537223316623

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
40035617Full LengthBC109118toll-like receptor 5
40035618Full LengthBC109119toll-like receptor 5

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_003259  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_003268 NP_003259   LRR_1
LRRCT
TIR

Related Sequences

 
mRNAGenPeptSwissProt
U88881 AAC34136 O60602
AF051151 AAC34376 O60602
BC109118 AAI09119 O60602
BC109119 AAI09120 Q32MI2
AB060695 BAB43955 O60602
AB445645 BAG55042 O60602

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens TLR5 NP_003259 M.musculus Tlr5 53791 Gene Info NP_058624 72
R.norvegicus Tlr5 289337   NP_001139300 70

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)