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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. SLIT3, slit homolog 3 (Drosophila)
Sequence ID:NM_003062
Entrez Gene ID:6586
Ensembl ID:ENSG00000184347

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:5q35Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:5: 168093294 - 168728133

 Exon Info From UCSC:
NM_003062

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
9007197Full LengthBC146759slit homolog 3 (Drosophila)

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_003053  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_003062 NP_003053 O75094 EGF
LRR_1
LRRNT
LRRCT
Laminin_G_2

Related Sequences

 
mRNAGenPeptSwissProt
AF075240 AAD19336 O75094
BC146759 AAI46760 O75094
AY358884 AAQ89243 O75094
AB011538 BAA32466 O75094
AB017169 BAA35186 O75094
AL122074 CAB59249 O75094

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens SLIT3 NP_003053 M.musculus Slit3 20564 Gene Info NP_035542 94
R.norvegicus Slit3 83467   NP_112611 94

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)