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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. BTBD9, BTB (POZ) domain containing 9
Sequence ID:NM_001099272
NM_001172418
NM_052893
NM_152733
RefSeqGene ID:NG_016545
Entrez Gene ID:114781
Ensembl ID:ENSG00000183826

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer Aberrations

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:6p21Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:6: 38142732 - 38563843

 Exon Info From UCSC:
NM_001099272
NM_001172418
NM_052893
NM_152733

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
40025568Full LengthBC101354BTB (POZ) domain containing 9
40025569Full LengthBC101355BTB (POZ) domain containing 9
40025572Full LengthBC101357BTB (POZ) domain containing 9

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_689946  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001099272 NP_001092742    
NM_001172418 NP_001165889    
NM_052893 NP_443125 Q96Q07  
NM_152733 NP_689946   BTB
F5_F8_type_C
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Related Sequences

 
mRNAGenPeptSwissProt
BC101354 AAI01355 Q96Q07
BC101355 AAI01356 Q96Q07
BC101357 AAI01358 Q96Q07
AB067467 BAB67773 Q96Q07
AK057507 BAB71514 Q96Q07
AK090930 BAC03550 Q8N299

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens BTBD9 NP_001092742 R.norvegicus Btbd9 294318   NP_001013091 96
M.musculus Btbd9 224671 Gene Info NP_081336 96
A.gambiae AgaP_AGAP006714 1270344   XP_309029 54
D.melanogaster CG1826 32000   NP_572649 54
C.elegans C05C8.6 179117   NP_504839 43

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)