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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. C1D, C1D nuclear receptor corepressor
Sequence ID:NM_001190263
NM_001190265
NM_006333
NM_173177
Entrez Gene ID:10438
Ensembl ID:ENSG00000197223

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:2p13-p12Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:2: 68270003 - 68290142

 Exon Info From UCSC:
NM_001190263
NM_001190265
NM_006333
NM_173177

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3906517Full LengthBC016284C1D nuclear receptor co-repressor
3930648Full LengthBC005235C1D nuclear receptor co-repressor
4096552Full LengthBC009584C1D nuclear receptor co-repressor
4102498Full LengthBC009589C1D nuclear receptor co-repressor

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_775269  NP_006324  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001190263 NP_001177192    
NM_001190265 NP_001177194    
NM_006333 NP_006324 Q13901 C1D
NM_173177 NP_775269 Q13901 C1D

Related Sequences

 
mRNAGenPeptSwissProt
BC005235 AAH05235 Q13901
BC009584 AAH09584 Q13901
BC009589 AAH09589 Q13901
BC016284 AAH16284 Q13901
EU446867 ABZ92396  
AK290451 BAF83140 Q13901
X95592 CAA64845 Q13901

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens C1D NP_775269 M.musculus C1d 57316 Gene Info NP_065583 91
R.norvegicus C1d 289810   NP_001099491 91

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)