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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. MYO1D, Myosin ID
Sequence ID:NM_015194
Entrez Gene ID:4642
Ensembl ID:ENSG00000176658

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer Aberrations

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, colon, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, peripheral nervous system, placenta, pooled tissue, prostate, retina, skin, soft tissue, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:17q11-q12Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:17: 30819627 - 31203902

 Exon Info From UCSC:
NM_015194

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
9007203Full LengthBC146763myosin ID
3846889IncompleteBC030796myosin ID

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_056009  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_015194 NP_056009 O94832 Myosin_head
IQ
Myosin_TH1

Related Sequences

 
mRNAGenPeptSwissProt
BC030796 AAH30796 Q8N618
BC146763 AAI46764 O94832
AB018270 BAA34447 O94832
BX537615 CAD97800 Q7Z3N6

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens MYO1D NP_056009 M.musculus Myo1d 338367 Gene Info NP_796364 98
R.norvegicus Myo1d 25485   NP_037115 98
D.melanogaster Myo31DF 34445   NP_001188784 55
C.elegans hum-5 175521   NP_497809 51
A.gambiae AgaP_AGAP010160 1279578   XP_319330 46

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)