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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. MTPN, myotrophin
Sequence ID:NM_145808
Entrez Gene ID:136319
Ensembl ID:ENSG00000105887

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssemblies

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, peripheral nervous system, placenta, pooled tissue, prostate, retina, salivary gland, skin, soft tissue, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:7q33Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:7: 135614517 - 135662053

NM_145808 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
193274135611504135614759
32753358135635346135635429
33593472135636264135636377
34733900135661776135662203

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3876632Full LengthBC028093myotrophin

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_665807  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001128619 NP_001122091 Q538Z0  
NM_145808 NP_665807 P58546
Q69YG1
Ank

Related Sequences

 
mRNAGenPeptSwissProt
AF130088 AAG35514 Q9H388
BC028093 AAH28093 P58546
Q69YG1
AF106075 AAP97226 P58546
Q69YG1
AY611627 AAU14892 Q538Z0
AK056225 BAG51651 Q69YG1
AL834231 CAD38909 P58546
Q69YG1
AM393216 CAL38094  
AM393266 CAL38144  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens MTPN NP_665807 M.musculus Mtpn 14489 Gene Info NP_032124 99
R.norvegicus Mtpn 79215   NP_077350 99
D.melanogaster CG31715 318909   NP_723568 52
D.melanogaster CG7423 32894   NP_573347 46
C.elegans C43H6.3 180545   NP_508437 44

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)