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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. ERC1, ELKS/RAB6-interacting/CAST family member 1
Sequence ID:NM_178040
NM_178039
Entrez Gene ID:23085
Ensembl ID:ENSG00000082805

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer Aberrations

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:12p13.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:12: 1100415 - 1600733

 Exon Info From UCSC:
NM_178040
NM_178039

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
9007473Full LengthBC150248ELKS/RAB6-interacting/CAST family member 1
40146804Full LengthBC132782ELKS/RAB6-interacting/CAST family member 1
40146806Full LengthBC132784ELKS/RAB6-interacting/CAST family member 1
3346702IncompleteBC005065ELKS/RAB6-interacting/CAST family member 1
4343516IncompleteBC037377RAB6 interacting protein 2
6142241IncompleteBC068006ELKS/RAB6-interacting/CAST family member 1

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_178039 NP_829883    
NM_178040 NP_829884 Q8IUD2  

Related Sequences

 
mRNAGenPeptSwissProt
BC068006 AAH68006 Q8IUD2
BC132782 AAI32783 Q8IUD2
BC132784 AAI32785 Q8IUD2
BC150248 AAI50249 Q8IUD2
AB029004 BAA83033 Q8IUD2
AB015617 BAA88763 Q8IUD2
AK000148 BAA90975 Q8IUD2
AK092201 BAC03827 Q8IUD2
AB053468 BAC54107 Q8IUD2
AB053469 BAC54108 Q8IUD2
AB053470 BAC54109 Q8IUD2
AB053471 BAC54110 Q8IUD2
AK294351 BAG57618 B4DG07

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens ERC1 NP_829884 R.norvegicus Erc1 266806   NP_740769 99
M.musculus Erc1 111173 Gene Info NP_444434 97
C.elegans elks-1 177102   NP_500329 30

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)