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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. LRP12, low density lipoprotein receptor-related protein 12
Sequence ID:NM_001135703
NM_013437
Entrez Gene ID:29967
Ensembl ID:ENSG00000147650

Database Links

UniGeneEntrez GeneEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:8q22.2Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:8: 105501477 - 105521239

 Exon Info From UCSC:
NM_001135703
NM_013437

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4842797Full LengthBC032109low density lipoprotein-related protein 12
4070101IncompleteBC017381low density lipoprotein-related protein 12

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_038465  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001135703 NP_001129175    
NM_013437 NP_038465 Q9Y561 Ldl_recept_a
CUB

Related Sequences

 
mRNAGenPeptSwissProt
AF166350 AAD44360 Q9Y561
BC032109 AAH32109 Q9Y561
DQ892323 ABM83249  
DQ895525 ABM86451  
AB208957 BAD92194 Q59H02
AK289752 BAF82441 Q9Y561
AK126348 BAG54310 B3KWZ8
AK299374 BAG61364 Q9Y561
CR749434 CAH18272 Q68DE8

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens LRP12 NP_038465 M.musculus Lrp12 239393 Gene Info NP_766402 93
R.norvegicus Lrp12 314941   NP_001128355 92

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)