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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. RALGAPB, Ral GTPase activating protein, beta subunit (non-catalytic)
Sequence ID:NM_020336
Entrez Gene ID:57148
Ensembl ID:ENSG00000170471

Database Links

UniGeneEntrez GeneEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer Aberrations

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal medulla, b-cell, bone, brain, cartilage, cerebellum, cerebrum, cervix, colon, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, peripheral nervous system, pituitary gland, placenta, pooled tissue, prostate, skin, soft tissue, spleen, stem cell, stomach, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:20q11.23Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:20: 37117044 - 37137750

 Exon Info From UCSC:
NM_020336

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5270777Full LengthBC047482KIAA1219
4285848IncompleteBC010916KIAA1219
4693777IncompleteBC018668KIAA1219
4798877IncompleteBC036425KIAA1219

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_020336 NP_065069 Q86X10  

Related Sequences

 
mRNAGenPeptSwissProt
BC010916 AAH10916 Q86X10
BC018668 AAH18668 Q86X10
BC047482 AAH47482 Q86X10
AB033045 BAA86533 Q86X10
AK123576 BAC85649 Q86X10
AK125260 BAG54177 B3KWL5
AK304242 BAG65110 B4E2E8
AB621815 BAK64151 G1UI28
AL132998 CAB61346 Q86X10
AL834436 CAD39096 Q86X10
BX641080 CAE46039 Q6MZJ2

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens RALGAPB NP_065069 M.musculus Ralgapb 228850 Gene Info NP_808326 97
R.norvegicus RGD1306861 362257   XP_002729287 97
D.melanogaster CG34408 31953   NP_572613 47
A.gambiae AgaP_AGAP007925 1278030   XP_317557 46
C.elegans D2085.5 3564922   NP_001022055 28

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)