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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. NMD3, NMD3 homolog (S. cerevisiae)
Sequence ID:NM_015938
Entrez Gene ID:51068
Ensembl ID:ENSG00000169251

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, ear, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, placenta, pooled tissue, prostate, salivary gland, skin, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:3q26.1Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:3: 160939106 - 160969039

 Exon Info From UCSC:
NM_015938

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4291797Full LengthBC013317NMD3 homolog (S. cerevisiae)

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_057022  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_015938 NP_057022 Q96D46 NMD3

Related Sequences

 
mRNAGenPeptSwissProt
AF132941 AAD27716 Q96D46
BC013317 AAH13317 Q96D46
EU832753 ACE87085  
EU832674 ACE87765  
AK021775 BAG51047 B3KMN5
AK094749 BAG52923 B3KT11
AK296710 BAG59303 B4DKU1

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens NMD3 NP_057022 M.musculus Nmd3 97112 Gene Info NP_598548 95
R.norvegicus Nmd3 310512   NP_001101152 95
D.melanogaster Nmd3 31195   NP_477332 55
A.gambiae AgaP_AGAP005375 1276076   XP_315383 54
C.elegans T25G3.3 3565801   NP_492114 52
S.pombe nmd3 2542319   NP_593077 50
S.cerevisiae NMD3 856575   NP_012040 47
A.thaliana AT2G03820 814908   NP_178476 46
N.crassa NCU08663 3878103   XP_961964 46

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)