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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. TMED4, Transmembrane emp24 protein transport domain containing 4
Sequence ID:NM_182547
Entrez Gene ID:222068
Ensembl ID:ENSG00000158604

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssemblies

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, brain, cartilage, cerebellum, cerebrum, cervix, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, pineal gland, placenta, pooled tissue, prostate, retina, skin, soft tissue, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:7p13Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:7: 44617909 - 44621082

NM_182547 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
284924461876244619226
4936394462069144620837
6407654462104744621172
7668664462132144621421
86710484462164544621826

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4798030Full LengthBC057851transmembrane emp24 protein transport domain containing 4
5223093Full LengthBC052641transmembrane emp24 protein transport domain containing 4
3456382IncompleteBC001576transmembrane emp24 protein transport domain containing 4
5184403IncompleteBC053583transmembrane emp24 protein transport domain containing 4

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_872353  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_182547 NP_872353 Q7Z7H5 EMP24_GP25L

Related Sequences

 
mRNAGenPeptSwissProt
BC052641 AAH52641 Q7Z7H5
BC057851 AAH57851 Q7Z7H5
AY191223 AAP20105 Q7Z7H5
AK074557 BAC11058 Q7Z7H5
AB097009 BAC77362 Q7Z7H5
AK290125 BAF82814 Q7Z7H5
AK294122 BAG57455 Q7Z7H5
AM393201 CAL38079 Q7Z7H5
AM393715 CAL38591  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens TMED4 NP_872353 R.norvegicus Tmed4 305502   NP_001100708 100
M.musculus Tmed4 103694 Gene Info NP_598781 95
A.gambiae AgaP_AGAP003553 1274213   XP_562397 71
D.melanogaster eca 41177   NP_788616 71
C.elegans Y60A3A.9 180307   NP_507861 69
N.crassa NCU04003 3873789   XP_957618 42
S.pombe SPBC16E9.09c 2540028   NP_595791 33
S.cerevisiae ERP6 852882   NP_011513 30
S.cerevisiae ERP1 851264   NP_009402 28

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)