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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. ZIC1, Zic family member 1
Sequence ID:NM_003412
RefSeqGene ID:NG_015886
Entrez Gene ID:7545
Ensembl ID:ENSG00000152977

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssemblies

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:3q24Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:3: 147127414 - 147128875

NM_003412 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
11701147127180147128880
17021865147130304147130467
18665229147131140147134503

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
8143851Full LengthBC104848Zic family member 1 (odd-paired homolog, Drosophila)
8143853Full LengthBC104850Zic family member 1 (odd-paired homolog, Drosophila)

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_003412 NP_003403 Q15915 zf-C2H2

Related Sequences

 
mRNAGenPeptSwissProt
BC104848 AAI04849 Q15915
BC104850 AAI04851 Q15915

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens ZIC1 NP_003403 R.norvegicus Zic1 64618   NP_073168 99
M.musculus Zic1 22771 Gene Info NP_033599 99

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)