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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. SLC18A2, Solute carrier family 18 (vesicular monoamine), member 2
Sequence ID:NM_003054
Entrez Gene ID:6571
Ensembl ID:ENSG00000165646

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssemblies

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:10q25Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:10: 119000630 - 119036777

 Exon Info From UCSC:
NM_003054

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
40025174Full LengthBC108927solute carrier family 18 (vesicular monoamine), member 2
40025175Full LengthBC108928solute carrier family 18 (vesicular monoamine), member 2

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_003045  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_003054 NP_003045 Q05940 MFS_1

Related Sequences

 
mRNAGenPeptSwissProt
L09118 AAA59877 Q05940
L23205 AAA61290 Q05940
L14269 AAA91853 Q05940
BC030593 AAH30593 Q4G147
BC108927 AAI08928 Q05940
BC108928 AAI08929 Q05940
AK314997 BAG37493 Q05940
X71354 CAA50489 Q05940

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens SLC18A2 NP_003045 M.musculus Slc18a2 214084 Gene Info NP_766111 93
R.norvegicus Slc18a2 25549   NP_037163 93
A.gambiae AgaP_AGAP004476 1274624   XP_313775 60
D.melanogaster Vmat 3346192   NP_001014524 57
C.elegans cat-1 180837   NP_001024936 54

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)