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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. STAU1, staufen, RNA binding protein, homolog 1 (Drosophila)
Sequence ID:NM_001037328
NM_004602
NM_017452
NM_017453
NM_017454
RefSeqGene ID:NG_029453
Entrez Gene ID:6780
Ensembl ID:ENSG00000124214

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, peripheral nervous system, pineal gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, soft tissue, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:20q13.1Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:20: 47731168 - 47805288

 Exon Info From UCSC:
NM_001037328
NM_004602
NM_017452
NM_017453
NM_017454

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
6047265Full LengthBC050432staufen, RNA binding protein, homolog 1 (Drosophila)
30528051Full LengthBC095397staufen, RNA binding protein, homolog 1 (Drosophila)
3546533IncompleteBC010169staufen, RNA binding protein, homolog 1 (Drosophila)
3546604IncompleteBC001893staufen, RNA binding protein, homolog 1 (Drosophila)

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_059348  NP_059347  NP_059346  NP_004593  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001037328 NP_001032405    
NM_004602 NP_004593   dsrm
NM_017452 NP_059346   dsrm
NM_017453 NP_059347 O95793 dsrm
NM_017454 NP_059348   dsrm

Related Sequences

 
mRNAGenPeptSwissProt
AF061938 AAD17530 O95793
AF061939 AAD17531 O95793
AF061940 AAD17532 O95793
AF061941 AAD17533 O95793
BC010169 AAH10169 Q6PJX3
BC050432 AAH50432 O95793
BC095397 AAH95397 O95793
AY529074 AAS76636 O95793
AY546099 AAS76637 O95793
EU832582 ACE86984  
EU832501 ACE87673  
AB209561 BAD92798 Q59F99
AK291487 BAF84176 A8K622
AK292859 BAF85548 O95793
AK091405 BAG52352 B3KRE0
AK298372 BAG60611 B4DPJ9
AJ132258 CAB40082 O95793
AL136601 CAB66536 O95793

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens STAU1 NP_059347 R.norvegicus Stau1 84496   NP_445888 92
M.musculus Stau1 20853 Gene Info NP_001103376 91

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)