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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. NCOA1, nuclear receptor coactivator 1
Sequence ID:NM_003743
NM_147223
NM_147233
RefSeqGene ID:NG_029014
Entrez Gene ID:8648
Ensembl ID:ENSG00000084676

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, colon, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, pancreas, pancreatic islet, parathyroid, peripheral nervous system, pituitary gland, placenta, pooled tissue, prostate, retina, skin, spleen, stem cell, stomach, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:2p23Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:2: 24807403 - 24991387

 Exon Info From UCSC:
NM_003743
NM_147223
NM_147233

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
40027438Full LengthBC111533nuclear receptor coactivator 1
40027439Full LengthBC111534nuclear receptor coactivator 1
4769500IncompleteBC035976nuclear receptor coactivator 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_003734  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_003743 NP_003734 Q15788 EC 2.3.1.48 PAS
DUF1518
NM_147223 NP_671756      
NM_147233 NP_671766      

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
U19179 AAA64187 Q15788 EC 2.3.1.48
U90661 AAB50242 Q15788 EC 2.3.1.48
U40396 AAC50305 Q15788 EC 2.3.1.48
U59302 AAC50631 Q15788 EC 2.3.1.48
BC111533 AAI11534 Q15788 EC 2.3.1.48
BC111534 AAI11535 Q15788 EC 2.3.1.48
AK290019 BAF82708 A8K1V4  
AJ000881 CAA04371 Q15788 EC 2.3.1.48
AJ000882 CAA04372 Q15788 EC 2.3.1.48

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens NCOA1 NP_003734 R.norvegicus Ncoa1 313929   NP_001101482 93
M.musculus Ncoa1 17977 Gene Info NP_035011 92

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta