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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. IPO9, importin 9
Sequence ID:NM_018085
Entrez Gene ID:55705
Ensembl ID:ENSG00000198700

Database Links

UniGeneEntrez GeneEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, peripheral nervous system, pituitary gland, placenta, pooled tissue, prostate, retina, skin, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:1q32.1Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:1: 201839913 - 201845882

 Exon Info From UCSC:
NM_018085

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3546351IncompleteBC003604importin 9
100061860BC156331importin 9

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_060555  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_018085 NP_060555 Q96P70 IBN_N

Related Sequences

 
mRNAGenPeptSwissProt
AF161391 AAF28951 Q96P70
BC003604 AAH03604 Q96P70
BC156331 AAI56332  
AF410465 AAL01416 Q96P70
AB033018 BAA86506 Q96P70
AK001264 BAA91588 Q96P70
AK027532 BAB55181 Q96P70
AK074740 BAC11173 Q96P70
AL834323 CAD38991 Q96P70

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens IPO9 NP_060555 M.musculus Ipo9 226432 Gene Info NP_722469 99
R.norvegicus Ipo9 304817   NP_001100650 99
A.gambiae AgaP_AGAP011156 1270773   XP_309493 40
D.melanogaster Ranbp9 41367   NP_650068 40
A.thaliana AT1G26170 839158   NP_173942 29
S.pombe kap114 2541885   NP_593739 26
N.crassa NCU06578 3878086   XP_961938 25
S.cerevisiae KAP114 852610   NP_011273 24

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)