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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. NCBP1, nuclear cap binding protein subunit 1, 80kDa
Sequence ID:NM_002486
Entrez Gene ID:4686
Ensembl ID:ENSG00000136937

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:9q34.1Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:9: 100396124 - 100433688

 Exon Info From UCSC:
NM_002486

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3138757Full LengthBC001450nuclear cap binding protein subunit 1, 80kDa

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_002477  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_002486 NP_002477 Q09161 MIF4G

Related Sequences

 
mRNAGenPeptSwissProt
BC001450 AAH01450 Q09161
DQ895382 ABM86308  
EU176351 ABW03802  
D32002 BAA06769 Q09161
AB209233 BAD92470 Q09161
AK312807 BAG35665 Q09161
X80030 CAA56334 Q09161

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens NCBP1 NP_002477 M.musculus Ncbp1 433702 Gene Info NP_001028373 98
R.norvegicus Ncbp1 298075   NP_001014785 98
D.melanogaster Cbp80 44409   NP_726938 59
A.gambiae NCBP1_ANOGA 1281974   XP_321964 57
C.elegans ncbp-1 172345   NP_491850 36
A.thaliana ABH1 815840   NP_565356 31

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)