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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. SGMS2, sphingomyelin synthase 2
Sequence ID:NM_001136257
NM_001136258
NM_152621
Entrez Gene ID:166929
Ensembl ID:ENSG00000164023

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:4q25Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:4: 108745817 - 108832055

 Exon Info From UCSC:
NM_001136257
NM_001136258
NM_152621

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4823252Full LengthBC028705sphingomyelin synthase 2
5273650Full LengthBC041369sphingomyelin synthase 2

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_001136257 NP_001129729      
NM_001136258 NP_001129730      
NM_152621 NP_689834 Q8NHU3 EC 2.7.8.27  

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
BC028705 AAH28705 Q8NHU3 EC 2.7.8.27
BC041369 AAH41369 Q8NHU3 EC 2.7.8.27
AF452717 AAP13352 Q8NHU3 EC 2.7.8.27
AK290344 BAF83033 Q8NHU3 EC 2.7.8.27
AK314049 BAG36758 Q8NHU3 EC 2.7.8.27

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens SGMS2 NP_001129729 M.musculus Sgms2 74442 Gene Info NP_083219 92
R.norvegicus Sgms2 310849   NP_001014065 91

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)