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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. CELF1, CUGBP, Elav-like family member 1
Sequence ID:NM_001025596
NM_001172639
NM_001172640
NM_006560
NM_198700
Entrez Gene ID:10658
Ensembl ID:ENSG00000149187

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer Aberrations

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, ear, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, pineal gland, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, soft tissue, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:11p11Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:11: 47491869 - 47545540

 Exon Info From UCSC:
NM_001025596
NM_001172639
NM_001172640
NM_006560
NM_198700

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5297141Full LengthBC031079CUG triplet repeat, RNA binding protein 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_001020767  NP_941989  NP_006551  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001025596 NP_001020767 Q92879 RRM_1
NM_001172639 NP_001166110    
NM_001172640 NP_001166111    
NM_006560 NP_006551   RRM_1
NM_198700 NP_941989   RRM_1

Related Sequences

 
mRNAGenPeptSwissProt
U63289 AAC50895 Q92879
AF267533 AAF78955 Q92879
AF267534 AAF78956 Q92879
AF248648 AAF86230 Q92879
BC031079 AAH31079 Q92879
DQ893717 ABM84643  
AB210019 BAE06101 Q92879
AK304430 BAG65257 B4E2U5
AJ007988 CAC20566 Q92879

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens CELF1 NP_001166110 M.musculus Celf1 13046 Gene Info NP_059064 100
R.norvegicus Celf1 362160   NP_001020592 99
D.melanogaster bru-2 250811   NP_788039 55
C.elegans etr-1 173401   NP_493673 52

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)