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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. ZRANB1, Zinc finger, RAN-binding domain containing 1
Sequence ID:NM_017580
Entrez Gene ID:54764
Ensembl ID:ENSG00000019995

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:10q26.13Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:10: 126630691 - 126673769

NM_017580 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
11185126630691126631875
11861373126655162126655349
13741527126660533126660686
15281599126662213126662284
16001798126662768126662966
17991919126670277126670397
19202049126671743126671872
20502279126672027126672256
22804941126673342126676003

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
100016009BC152728zinc finger, RAN-binding domain containing 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_060050  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_017580 NP_060050 Q9UGI0 EC 3.4.19.12 zf-RanBP
OTU

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
BC152728 AAI52729    
AK302810 BAG64010 Q9UGI0 EC 3.4.19.12
AJ252060 CAB64449 Q9UGI0 EC 3.4.19.12
AL832925 CAH10620 Q9UGI0 EC 3.4.19.12

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens ZRANB1 NP_060050 M.musculus Zranb1 360216 Gene Info NP_997185 99
D.melanogaster trbd 41179   NP_649931 49
A.gambiae AgaP_AGAP003853 1271590   XP_310412 48

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)