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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. WWTR1, WW domain containing transcription regulator 1
Sequence ID:NM_001168278
NM_001168280
NM_015472
Entrez Gene ID:25937
Ensembl ID:ENSG00000018408

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer Aberrations

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, peripheral nervous system, placenta, pooled tissue, prostate, salivary gland, skin, soft tissue, spleen, stem cell, stomach, testis, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:3q23-q24Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:3: 149238381 - 149421060

 Exon Info From UCSC:
NM_001168278
NM_001168280
NM_015472

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3635491Full LengthBC014052WW domain containing transcription regulator 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_056287  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001168278 NP_001161750    
NM_001168280 NP_001161752    
NM_015472 NP_056287 Q9GZV5 WW

Related Sequences

 
mRNAGenPeptSwissProt
BC014052 AAH14052 Q9GZV5
DQ893378 ABM84304  
DQ896699 ABM87698  
AK022036 BAB13957 Q9GZV5
AL050107 CAB43275 Q9GZV5
AJ299431 CAC17722 Q9GZV5
AL833852 CAD38711 Q9GZV5

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens WWTR1 NP_056287 M.musculus Wwtr1 97064 Gene Info NP_001161753 92
R.norvegicus Wwtr1 295062   NP_001020040 92

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)