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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.

Gene Info

Gene Information For:Hs. TRMT10C, tRNA methyltransferase 10 homolog C (S. cerevisiae)
Sequence ID:NM_017819
Entrez Gene ID:54931
Ensembl ID:ENSG00000174173

Database Links

UniGeneEntrez GeneEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer Aberrations

Gene Expression Data

Cytogenetic Location (from UniGene)

Cytogenetic Location:3q12.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:3: 101280721 - 101284070

NM_017819 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4719195Full LengthBC035967RNA (guanine-9-) methyltransferase domain containing 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_060289  

Protein Infomation

NM_017819 NP_060289 Q7L0Y3 tRNA_m1G_MT

Related Sequences

AF155111 AAD42877 Q7L0Y3
AF226052 AAF86952 Q7L0Y3
BC035967 AAH35967 Q7L0Y3
AY561707 AAS66980 Q7L0Y3
HQ447662 ADQ32147  
AK000439 BAA91166 Q7L0Y3

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene Info Protein
H.sapiens RG9MTD1 NP_060289 M.musculus Rg9mtd1 52575 Gene Info NP_083368 78
R.norvegicus Rg9mtd1 304012   NP_001008338 76
A.gambiae AgaP_AGAP007211 1269920   XP_308574 40
D.melanogaster CG5190 37124   NP_611335 34
C.elegans F46F11.10 259376   NP_491647 28

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)