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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. SLC4A5, solute carrier family 4, sodium bicarbonate cotransporter, member 5
Sequence ID:NM_021196
NM_133478
NM_033323
NM_133479
RefSeqGene ID:NG_032663
Entrez Gene ID:57835
Ensembl ID:ENSG00000188687

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:2p13Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:2: 74448593 - 74542150

 Exon Info From UCSC:
NM_021196
NM_133478

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
40008543Full LengthBC109221solute carrier family 4, sodium bicarbonate cotransporter, member 5

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_597812  NP_067019  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_021196 NP_067019 Q9BY07 HCO3_cotransp
Band_3_cyto
NM_133478 NP_597812   HCO3_cotransp
Band_3_cyto

Related Sequences

 
mRNAGenPeptSwissProt
BC109221 AAI09222 Q9BY07
AF243499 AAK26741 Q9BY07
AF293337 AAK97072 Q9BY07
AF293338 AAK97073 Q9BY07
AF452248 AAL48291 Q9BY07
AF453528 AAL50802 Q9BY07
AB209752 BAD92989 Q9BY07

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens SLC4A5 NP_067019 M.musculus Slc4a5 232156 Gene Info NP_001159539 93
R.norvegicus Slc4a5 297386   NP_997677 90

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)