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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. FOXP1, forkhead box P1
Sequence ID:NM_001012505
NM_001244808
NM_001244810
NM_001244812
NM_001244813
NM_001244814
NM_001244815
NM_001244816
NM_032682
RefSeqGene ID:NG_028243
Entrez Gene ID:27086
Ensembl ID:ENSG00000114861

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer Aberrations

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cartilage, cerebrum, cervix, colon, ear, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, pineal gland, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, soft tissue, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:3p14.1Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:3: 71008359 - 71090610

 Exon Info From UCSC:
NM_001012505
NM_032682

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
40123493IncompleteBC131720forkhead box P1
100015965BC152752forkhead box P1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_116071  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001012505 NP_001012523    
NM_001244808 NP_001231737    
NM_001244810 NP_001231739    
NM_001244812 NP_001231741    
NM_001244813 NP_001231742    
NM_001244814 NP_001231743    
NM_001244815 NP_001231744    
NM_001244816 NP_001231745    
NM_032682 NP_116071 Q548T7
Q9H334
Fork_head

Related Sequences

 
mRNAGenPeptSwissProt
AF151049 AAF36135 Q9H334
AF146696 AAG47632 Q548T7
Q9H334
BC005055 AAH05055 Q9H334
BC054815 AAH54815 Q9H334
BC071893 AAH71893 Q9H334
BC080521 AAH80521 Q9H334
BC131720 AAI31721 A3KMG1
BC152752 AAI52753  
AF275309 AAK69408 Q9H334
AF250920 AAL56661 Q548T7
Q9H334
BT006643 AAP35289 Q9H334
AK027264 BAB55005 Q9H334
AK074321 BAB85050 Q8TEA2
AK092383 BAC03875 Q8NAN6
AK074569 BAC11065 Q8N2P0
AB052767 BAC53800 Q8IXF4
AK122710 BAG53682 B3KV70
AK297649 BAG60016 B4DMV4
CR457164 CAG33445 Q6IAJ1

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens FOXP1 NP_116071 M.musculus Foxp1 108655 Gene Info NP_444432 96
R.norvegicus Foxp1 297480   NP_001029303 96
D.melanogaster fd85E 41182   NP_001097726 59
A.gambiae AgaP_AGAP000569 1271653   XP_565765 46

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)