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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. KRT27, keratin 27
Sequence ID:NM_181537
RefSeqGene ID:NG_012418
Entrez Gene ID:342574
Ensembl ID:ENSG00000171446

Database Links

UniGeneEntrez GeneEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:17q21.2Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:17: 38933059 - 38933527

NM_181537 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
23313893306038933389
3323813893350438933553
3825993893376638933983
6007253893575338935878
7268873893595138936112
88810443893655138936707
104511273893743938937521
112816123893830138938785

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
100066360Full LengthBC166634keratin 27

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_853515  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_181537 NP_853515 Q7Z3Y8 Filament

Related Sequences

 
mRNAGenPeptSwissProt
BC166634 AAI66634 Q7Z3Y8
AJ564206 CAD91906 Q7Z3Y8

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens KRT27 NP_853515 R.norvegicus Krt27 450229   NP_001008824 90
M.musculus Krt27 16675 Gene Info NP_034796 89

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)