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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. OCLN, occludin
Sequence ID:NM_001205254
NM_001205255
NM_002538
RefSeqGene ID:NG_028291
Entrez Gene ID:100506658
Ensembl ID:ENSG00000197822

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Associated Diseases (from OMIM)

DiseaseOther Genes
BAND-LIKE CALCIFICATION WITH SIMPLIFIED GYRATION ANDPOLYMICROGYRIA 

Cytogenetic Location (from UniGene)

Cytogenetic Location:5q13.1Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:5: 68800071 - 68849497

Transcript StartTranscript EndChromosomal Start Chromosomal End
13686878811868788485
3694866880000368800120
48711656880496768805645
116613276880977468809935
132814736883052068830665
147416896884073068840945
169018616884375668843927
186219036884737068847411
190426376884939668850129

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_002529  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001205254 NP_001192183    
NM_001205255 NP_001192184    
NM_002538 NP_002529 Q16625 MARVEL
Occludin_ELL

Related Sequences

 
mRNAGenPeptSwissProt
U53823 AAB00195 Q16625
U49184 AAC50451 Q16625
BC029886 AAH29886 Q16625
DQ892423 ABM83349  
DQ895637 ABM86563  
FJ786083 ACT53743 Q16625
FJ786084 ACT53744 Q16625
GQ225096 ACT83431 Q16625
GQ225097 ACT83432 Q16625
GQ225098 ACT83433 Q16625
GQ402517 ACZ80515 Q16625
AK290697 BAF83386 A8K3T2
AB451306 BAG70120 Q16625
AB451437 BAG70251 Q16625
BK001650 DAA01837 Q16625

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens OCLN NP_001192183 M.musculus Ocln 18260 Gene Info NP_032782 91
R.norvegicus Ocln 83497   NP_112619 89

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)