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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. ANKRD27, ankyrin repeat domain 27 (VPS9 domain)
Sequence ID:NM_032139
Entrez Gene ID:84079
Ensembl ID:ENSG00000105186

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:19q13.11Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:19: 33128205 - 33166075

 Exon Info From UCSC:
NM_032139

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
6067580Full LengthBC050529ankyrin repeat domain 27 (VPS9 domain)
5273645IncompleteBC045605ankyrin repeat domain 27 (VPS9 domain)

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_115515  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_032139 NP_115515 Q96NW4 Ank
VPS9

Related Sequences

 
mRNAGenPeptSwissProt
BC050529 AAH50529 Q96NW4
AF447882 AAQ04657 Q96NW4
AK054561 BAB70755 Q96NW4
AL136784 CAB66718 Q96NW4
AL834335 CAD39003 Q96NW4
AM393863 CAL38738  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens ANKRD27 NP_115515 R.norvegicus Ankrd27 361555   XP_341844 90
M.musculus Ankrd27 245886 Gene Info NP_663608 82
A.gambiae AgaP_AGAP003152 1273823   XP_312841 34

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)