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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. TAF9B, TAF9B RNA polymerase II, TATA box binding protein (TBP)-associated factor, 31kDa
Sequence ID:NM_015975
RefSeqGene ID:NG_012570
Entrez Gene ID:51616
Ensembl ID:ENSG00000187325

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:Xq13.1-q21.1Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:X: 77386664 - 77395130

NM_015975 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
2720517738524577387269
205221627738883477388944
216322387739241177392486
223923737739324577393379
237425107739345877393594
251125927739433977394420
259327147739505777395178

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3996687Full LengthBC009566TAF9B RNA polymerase II, TATA box binding protein (TBP)-associated factor, 31kDa
4276335Full LengthBC010350TAF9B RNA polymerase II, TATA box binding protein (TBP)-associated factor, 31kDa
5246715Full LengthBC071649TAF9B RNA polymerase II, TATA box binding protein (TBP)-associated factor, 31kDa
9056880Full LengthBC146952TAF9B RNA polymerase II, TATA box binding protein (TBP)-associated factor, 31kDa
9056888Full LengthBC146960TAF9B RNA polymerase II, TATA box binding protein (TBP)-associated factor, 31kDa

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_057059  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_015975 NP_057059 Q9HBM6 TFIID-31kDa

Related Sequences

 
mRNAGenPeptSwissProt
AF220509 AAG09711 Q9HBM6
BC009566 AAH09566 Q9HBM6
BC010350 AAH10350 Q9HBM6
BC071649 AAH71649 Q9HBM6
BC146952 AAI46953 Q9HBM6
BC146960 AAI46961 Q9HBM6
DQ891928 ABM82854  
DQ895115 ABM86041  
AK312579 BAG35473 B2R6H6

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens TAF9B NP_057059 R.norvegicus Taf9b 171152   NP_598299 91
M.musculus Taf9b 407786 Gene Info NP_001161460 91

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)