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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. SYTL4, synaptotagmin-like 4
Sequence ID:NM_001129896
NM_001174068
NM_080737
RefSeqGene ID:NG_016858
Entrez Gene ID:94121
Ensembl ID:ENSG00000102362

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:Xq21.33Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:X: 99929488 - 99957103

 Exon Info From UCSC:
NM_001129896
NM_001174068
NM_080737

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3908307Full LengthBC014913synaptotagmin-like 4

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_542775  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001129896 NP_001123368    
NM_001174068 NP_001167539    
NM_080737 NP_542775 Q96C24 C2

Related Sequences

 
mRNAGenPeptSwissProt
BC014913 AAH14913 Q96C24
AF302493 AAQ14492 Q71SF7
AK292588 BAF85277 A8K973
AK313086 BAG35911 B2R7R4
AK098279 BAG53606 B3KUZ4
BX537410 CAD97652 Q96C24
AL832596 CAI46126 Q96C24

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens SYTL4 NP_542775 R.norvegicus Sytl4 140594   NP_536335 92
M.musculus Sytl4 27359 Gene Info NP_038785 91

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)