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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. CBX6, chromobox homolog 6
Sequence ID:NM_014292
Entrez Gene ID:23466
Ensembl ID:ENSG00000183741

Database Links

UniGeneEntrez GeneEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:22q13.1Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:22: 39265576 - 39268254

NM_014292 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
3329753926026339263205
297630423926748439267550
304331083926769639267761
310931523926790639267949
315332843926812639268257

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4554483Full LengthBC012111chromobox homolog 6
6009294Full LengthBC064900chromobox homolog 6

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_055107  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_014292 NP_055107 O95503 Chromo

Related Sequences

 
mRNAGenPeptSwissProt
BC012111 AAH12111 O95503
BC064900 AAH64900 O95503
DQ893667 ABM84593  
DQ895787 ABM86713  
AK293035 BAF85724 O95503
AK094829 BAG52939 B3KT27

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens CBX6 NP_055107 M.musculus Cbx6 494448   NP_083039 89
R.norvegicus Cbx6 315136   NP_001012119 88

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)