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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. RNF215, Ring finger protein 215
Sequence ID:NM_001017981
Entrez Gene ID:200312
Ensembl ID:ENSG00000099999

Database Links

UniGeneEntrez GeneEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:22q12.2Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:22: 30775488 - 30782875

NM_001017981 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
58113077480430775610
8129143077569930775801
91510583077605030776193
105911783077627030776389
117913353078032730780483
133614213078189230781977
142214933078205830782129
149416373078260430782747
163819223078301730783301

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
100016321Full LengthBC153028ring finger protein 215
100015356BC148383ring finger protein 215

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_001017981  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001017981 NP_001017981 Q9Y6U7 zf-C3HC4

Related Sequences

 
mRNAGenPeptSwissProt
BC148383 AAI48384 Q9Y6U7
BC153028 AAI53029  
AK293904 BAG57289 B4DF28

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens RNF215 NP_001017981 R.norvegicus Rnf215 305478   NP_001100704 92
M.musculus Rnf215 71673 Gene Info NP_082135 91

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)