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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. ZC3H7B, Zinc finger CCCH-type containing 7B
Sequence ID:NM_017590
Entrez Gene ID:23264
Ensembl ID:ENSG00000100403

Database Links

UniGeneEntrez GeneEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, brain, cartilage, cerebellum, cerebrum, cervix, colon, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, peripheral nervous system, pituitary gland, placenta, pooled tissue, prostate, retina, skin, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:22q13.2Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:22: 41721753 - 41756107

 Exon Info From UCSC:
NM_017590

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
8860405Full LengthBC152558zinc finger CCCH-type containing 7B
100068236Full LengthBC167846zinc finger CCCH-type containing 7B
3690478IncompleteBC004857zinc finger CCCH-type containing 7B
3883091IncompleteBC024313zinc finger CCCH-type containing 7B
3895776IncompleteBC047002zinc finger CCCH-type containing 7B
30527757IncompleteBC098378zinc finger CCCH-type containing 7B

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_060060  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_017590 NP_060060   TPR_1
zf-CCCH
TPR_2

Related Sequences

 
mRNAGenPeptSwissProt
AF188530 AAF05541 Q9UGR2
BC004857 AAH04857 Q9BSS8
BC024313 AAH24313 Q9UGR2
BC152558 AAI52559 Q9UGR2
BC167846 AAI67846  
AB028954 BAA82983 Q9UGR2
AK315009 BAG37501 Q9UGR2

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens ZC3H7B NP_060060 M.musculus Zc3h7b 20286 Gene Info NP_001074485 96
R.norvegicus Zc3h7b 315158   NP_001124167 96

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)