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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. HOXA2, Homeobox A2
Sequence ID:NM_006735
RefSeqGene ID:NG_012078
Entrez Gene ID:3199
Ensembl ID:ENSG00000105996

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:7p15.2Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:7: 27141236 - 27142302

NM_006735 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1511252713997327141083
112617912714172827142393

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
9020489Full LengthBC136500homeobox A2
40146602Full LengthBC130571homeobox A2

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_006726  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_006735 NP_006726 O43364 Homeobox

Related Sequences

 
mRNAGenPeptSwissProt
BC130571 AAI30572 O43364
BC136500 AAI36501 O43364
AK096742 BAG53357 B3KU95

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens HOXA2 NP_006726 M.musculus Hoxa2 15399 Gene Info NP_034581 96
R.norvegicus Hoxa2 24452   NP_036713 96

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)