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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. NR1D1, nuclear receptor subfamily 1, group D, member 1
Sequence ID:NM_021724
Entrez Gene ID:9572
Ensembl ID:ENSG00000126368

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:17q11.2Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:17: 38249046 - 38256836

NM_021724 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
195173824903638249534
5187283825016438250374
7299143825118738251372
91515583825169638252339
155917033825269538252839
170417923825294338253031
179321313825331738253655
213227883825631638256972

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
6190140Full LengthBC047875nuclear receptor subfamily 1, group D, member 1
6195844Full LengthBC056148nuclear receptor subfamily 1, group D, member 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_068370  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_021724 NP_068370 P20393 Hormone_recep
zf-C4

Related Sequences

 
mRNAGenPeptSwissProt
M34339 AAA36561 P20393
M34340 AAA36562 P20393
M24900 AAA52332 P20393
M24898 AAA52335 P20393
BC047875 AAH47875 P20393
BC056148 AAH56148 P20393
HQ692861 ADZ17372 F1D8S3
AK300155 BAG61939 B4DTC7
X72631 CAB53540 P20393

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens NR1D1 NP_068370 M.musculus Nr1d1 217166 Gene Info NP_663409 96
R.norvegicus Nr1d1 252917   NP_001106893 95

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)