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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. NLRC3, NLR family, CARD domain containing 3
Sequence ID:NM_178844
Entrez Gene ID:197358
Ensembl ID:ENSG00000167984

Database Links

UniGeneEntrez GeneEnsembl GeneHPRDSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:16p13.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:16: 3598134 - 3606995

 Exon Info From UCSC:
NM_178844

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
9093240IncompleteBC169296NOD3 protein
9093248IncompleteBC169295NOD3 protein
9093249IncompleteBC169297NOD3 protein

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_849172  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_178844 NP_849172 Q7RTR2 LRR_1
NACHT

Related Sequences

 
mRNAGenPeptSwissProt
AF501291 AAM22459 Q7RTR2
AF501292 AAM22460 Q7RTR2
AY601811 AAT48367 Q7RTR2
FJ889357 ACP40993 C3VPR7
AK074109 BAB84935 Q7RTR2
AK090431 BAC03412 Q7RTR2
AK090476 BAC03457 Q8NF06
BK001112 DAA01245 Q7RTR2

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens NLRC3 NP_849172 M.musculus Nlrc3 268857 Gene Info NP_001074749 80

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)