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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. GLIS2, GLIS family zinc finger 2
Sequence ID:NM_032575
RefSeqGene ID:NG_016391
Entrez Gene ID:84662
Ensembl ID:ENSG00000126603

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Associated Diseases (from OMIM)

DiseaseOther Genes
NEPHRONOPHTHISIS 7 

Cytogenetic Location (from UniGene)

Cytogenetic Location:16p13.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:16: 4382224 - 4387802

NM_032575 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
122943822244382452
23040243833474383519
40357943848014384977
58071343850604385193
71483243852754385393
833370543867254389597

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
100014972Full LengthBC146548GLIS family zinc finger 2
100014501BC141548GLIS family zinc finger 2

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_115964  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_032575 NP_115964 Q9BZE0 zf-C2H2

Related Sequences

 
mRNAGenPeptSwissProt
BC141548 AAI41549  
BC146548 AAI46549  
AF325914 AAK00954 Q9BZE0
AK095566 BAG53086 B3KTH4
AK126918 BAG54396 Q9BZE0

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens GLIS2 NP_115964 R.norvegicus Glis2 302946   NP_001100448 94
M.musculus Glis2 83396 Gene Info NP_112461 93

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)