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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. ALG1, asparagine-linked glycosylation 1, beta-1,4-mannosyltransferase homolog (S. cerevisiae)
Sequence ID:NM_019109
RefSeqGene ID:NG_009202
Entrez Gene ID:56052
Ensembl ID:ENSG00000033011

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, ear, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, peripheral nervous system, placenta, pooled tissue, prostate, skin, soft tissue, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:16p13.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:16: 5121836 - 5135329

 Exon Info From UCSC:
NM_019109

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3510605Full LengthBC004402asparagine-linked glycosylation 1, beta-1,4-mannosyltransferase homolog (S. cerevisiae)
5276692Full LengthBC031095asparagine-linked glycosylation 1, beta-1,4-mannosyltransferase homolog (S. cerevisiae)
4821690IncompleteBC031873asparagine-linked glycosylation 1 homolog (S. cerevisiae, beta-1,4-mannosyltransferase)

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_061982  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_019109 NP_061982 Q9BT22 EC 2.4.1.142 Glycos_transf_1
NM_201400 NP_958802 Q96G04    
NM_201598 NP_963892      

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
BC004402 AAH04402 Q9BT22 EC 2.4.1.142
BC010084 AAH10084 Q96G04  
BC031095 AAH31095 Q9BT22 EC 2.4.1.142
AY037162 AAK67640 Q96G04  
AY359073 AAQ89432 Q9BT22 EC 2.4.1.142
DQ895010 ABM85936    
EU176309 ABW03760    
HQ447811 ADQ32295    
AB019038 BAA90748 Q9BT22 EC 2.4.1.142
AK075373 BAC11576 Q9BT22 EC 2.4.1.142
AK298144 BAG60420 B4DP08  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens ALG1 NP_061982 M.musculus Alg1 208211 Gene Info NP_663337 80
R.norvegicus Alg1 360475   NP_001101734 79
D.melanogaster CG18012 42146   NP_650662 47
A.gambiae AgaP_AGAP003551 1274210   XP_313298 46
C.elegans Beta-mannosyltransferase 175920   NP_498420 45
A.thaliana AT1G16570 838227   NP_173105 45
N.crassa NCU07261 3878254   XP_962115 44
S.pombe alg1 2541937   NP_593186 41
S.cerevisiae ALG1 852407   NP_009668 39

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)