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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. STUB1, STIP1 homology and U-box containing protein 1, E3 ubiquitin protein ligase
Sequence ID:NM_005861
Entrez Gene ID:10273
Ensembl ID:ENSG00000103266

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cartilage, cerebrum, cervix, colon, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, peripheral nervous system, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, stem cell, stomach, synovium, t-cell, testis, thyroid, uncharacterized tissue, uterus
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:16p13.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:16: 730469 - 732746

NM_005861 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1570730114730683
571769731151731349
770935731437731602
9361023731792731879
10241080732019732075
10811197732164732280
11981601732363732766

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
2959735Full LengthBC007545STIP1 homology and U-box containing protein 1
2959735Full LengthBC022788STIP1 homology and U-box containing protein 1
3346811Full LengthBC017178STIP1 homology and U-box containing protein 1
3847168Full LengthBC063617STIP1 homology and U-box containing protein 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_005852  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_005861 NP_005852 Q9UNE7 TPR_1
U-box

Related Sequences

 
mRNAGenPeptSwissProt
AF039689 AAC18038 Q9UNE7
AF129085 AAD33400 Q9UNE7
AF217968 AAG17211 Q9UNE7
BC007545 AAH07545 Q9UNE7
BC017178 AAH17178 Q9UNE7
BC022788 AAH22788 Q9UNE7
BC063617 AAH63617 Q9UNE7
AF432221 AAL99927 Q9UNE7
DQ893185 ABM84111  
DQ896502 ABM87501  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens STUB1 NP_005852 M.musculus Stub1 56424 Gene Info NP_062693 98
R.norvegicus Stub1 287155   NP_001020796 98
A.gambiae AgaP_AGAP008918 1279886   XP_319666 58
D.melanogaster CHIP 34433   NP_477441 58
C.elegans chn-1 172303   NP_491781 44
A.thaliana CHIP 819925   NP_566305 35
N.crassa NCU10270 5847940   XP_001728535 30

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)