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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. VPS33A, vacuolar protein sorting 33 homolog A (S. cerevisiae)
Sequence ID:NM_022916
Entrez Gene ID:65082
Ensembl ID:ENSG00000139719

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:12q24.31Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:12: 122716093 - 122750979

 Exon Info From UCSC:
NM_022916

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3855313Full LengthBC016617vacuolar protein sorting 33 homolog A (S. cerevisiae)

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_075067  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_022916 NP_075067 Q96AX1 Sec1

Related Sequences

 
mRNAGenPeptSwissProt
BC016617 AAH16617 Q96AX1
AF439857 AAL33577 Q96AX1
EU176253 ABW03704  
AK026048 BAB15336 Q9H6C4
AK026840 BAB15570 Q96AX1
AK315545 BAG37923 B2RDH6

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens VPS33A NP_075067 M.musculus Vps33a 77573 Gene Info NP_084205 98
R.norvegicus Vps33a 65081   NP_075250 97
A.gambiae AgaP_AGAP003203 1273876   XP_312907 51
D.melanogaster car 32947   NP_523410 46
N.crassa NCU09121 3875041   XP_958893 40
A.thaliana ATVPS33 824651   NP_001154679 39
S.pombe vps33 2539880   NP_596210 35
P.falciparum PFI1700c 813620   XP_001352216 29

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)