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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. TRIM3, tripartite motif containing 3
Sequence ID:NM_001248006
NM_001248007
NM_006458
NM_033278
Entrez Gene ID:10612
Ensembl ID:ENSG00000110171

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:11p15.5Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:11: 6470232 - 6486925

 Exon Info From UCSC:
NM_006458
NM_033278

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
6108991Full LengthBC096827tripartite motif-containing 3

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_006449  NP_150594  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001248006 NP_001234935    
NM_001248007 NP_001234936    
NM_006458 NP_006449   zf-C3HC4
Filamin
zf-B_box
NHL
NM_033278 NP_150594 O75382 zf-C3HC4
Filamin
zf-B_box
NHL

Related Sequences

 
mRNAGenPeptSwissProt
AF045239 AAC24809 O75382
AF220020 AAG53474 O75382
AF220021 AAG53475 O75382
AF220022 AAG53476 O75382
BC096827 AAH96827 O75382
AK126685 BAC86643 Q6ZTE7
AK291396 BAF84085 O75382
AK122682 BAG53665 B3KV53
AK298843 BAH12882 B7Z5E6
AK299586 BAH13074 B7Z5Y8

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens TRIM3 NP_006449 M.musculus Trim3 55992 Gene Info NP_061368 99
R.norvegicus Trim3 83616   NP_113974 98

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)