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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. PANX1, Pannexin 1
Sequence ID:NM_015368
RefSeqGene ID:NG_027936
Entrez Gene ID:24145
Ensembl ID:ENSG00000110218

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:11q21Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:11: 93862094 - 93915132

NM_015368 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
15669386209393862658
5677069388665693886795
7079309391153493911757
93115869391276793913422
158727669391395593915134

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4390851Full LengthBC016931pannexin 1

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_015368 NP_056183 Q96RD7  

Related Sequences

 
mRNAGenPeptSwissProt
BC016931 AAH16931 Q96RD7
AF398509 AAK91714 Q96RD7
AY359023 AAQ89382 Q96RD7
AK074897 BAC11276 Q96RD7
FM201789 CAR31475 B6ETL5

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens PANX1 NP_056183 R.norvegicus Panx1 315435   NP_955429 88
M.musculus Panx1 55991 Gene Info NP_062355 87

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)