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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. CLMP, CXADR-like membrane protein
Sequence ID:NM_024769
Entrez Gene ID:79827
Ensembl ID:ENSG00000166250

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:11q24.1Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:11: 122943032 - 123065989

NM_024769 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
181465122943034122944481
14661607122945409122945550
16081730122953792122953914
17311898122954387122954554
18992100122955219122955420
21012258122968502122968659
22592645123065620123066006

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4122648Full LengthBC009371adipocyte-specific adhesion molecule

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_079045  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_024769 NP_079045 Q9H6B4 ig
V-set

Related Sequences

 
mRNAGenPeptSwissProt
BC009371 AAH09371 Q9H6B4
AY326422 AAP88386 Q9H6B4
AY358340 AAQ88706 Q9H6B4
HQ447859 ADQ32343  
AK026068 BAB15347 Q9H6B4
AK304843 BAG65585 B4E3S3
BK001245 DAA01139 Q9H6B4

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens CLMP NP_079045 M.musculus 9030425E11Rik 71566 Gene Info NP_598494 93
R.norvegicus Clmp 286939   NP_775177 93

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)