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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. DDX10, DEAD (Asp-Glu-Ala-Asp) box polypeptide 10
Sequence ID:NM_004398
Entrez Gene ID:1662
Ensembl ID:ENSG00000178105

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:11q22-q23Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:11: 108550095 - 108559711

 Exon Info From UCSC:
NM_004398

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
7939499Full LengthBC093654DEAD (Asp-Glu-Ala-Asp) box polypeptide 10
7939501Full LengthBC093656DEAD (Asp-Glu-Ala-Asp) box polypeptide 10
30388370Full LengthBC091521DEAD (Asp-Glu-Ala-Asp) box polypeptide 10
5500425IncompleteBC049217DEAD (Asp-Glu-Ala-Asp) box polypeptide 10
6141012IncompleteBC064921DEAD (Asp-Glu-Ala-Asp) box polypeptide 10

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_004389  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_004398 NP_004389 Q13206 EC 3.6.4.13 DEAD
Helicase_C

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
U28042 AAC50823 Q13206 EC 3.6.4.13
BC049217 AAH49217 Q86VR6  
BC091521 AAH91521 Q13206 EC 3.6.4.13
BC093654 AAH93654 Q13206 EC 3.6.4.13
BC093656 AAH93656 Q13206 EC 3.6.4.13
AB001343 BAA20386    
AB040537 BAB18536 Q13206 EC 3.6.4.13
AB209884 BAD93121 Q59EC7  
AK315216 BAG37650 Q13206 EC 3.6.4.13
AK296752 BAG59335 B4DKX3  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens DDX10 NP_004389 R.norvegicus Ddx10 300710   NP_001100290 87
M.musculus Ddx10 77591 Gene Info NP_084212 86
D.melanogaster CG5800 32742   NP_573230 48
A.gambiae AgaP_AGAP001057 4576037   XP_001230842 47
C.elegans Y23H5B.6 171810   NP_490989 46
S.pombe SPAC1093.05 2541630   NP_594652 46
A.thaliana AT5G54910 835582   NP_200302 45
N.crassa NCU04439 3873647   XP_957516 45
S.cerevisiae HCA4 853419   NP_012501 44

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)